scREAD Data ID: AD00107
Species: Human
Region: Prefrontal cortex
Condition: Disease
Braak stage: 3, 5
Gender: Male
Age: 77-90+ years
Number of AD associated cells: 16954
Number of control-like cells: 1856
Number of identified cell types: 7
Title: Human_and_Mouse Single-Nucleus Transcriptomics Reveal TREM2-dependent_and_TREM2-independent Cellular Responses in Alzheimer's Disease
Methodology: Single-nucleus RNA-seq
Protocol: 10x Genomics
GEO/synapse number: syn21125841
Pubmed ID: 31932797
Citation: Zhou Y, Song WM, Andhey PS, Swain A et al. Human_and_mouse single-nucleus transcriptomics reveal TREM2-dependent_and_TREM2-independent cellular responses in Alzheimer’s disease. Nat Med 2020 Jan;26(1):131-142.
Cell type & subcluster:
Gene expression
Point size:
Please enter a gene symbol.
Group:
Cell type of interest:
Log2 fold-change cutoff:
Adjusted p-value cutoff:
SLC1A2 | 2.78265 | 0.946 | 0.286 | 0.00e+0 |
ADGRV1 | 2.64563 | 0.928 | 0.082 | 0.00e+0 |
GJA1 | 2.52543 | 0.883 | 0.075 | 0.00e+0 |
AQP4 | 2.47219 | 0.924 | 0.119 | 0.00e+0 |
COL5A3 | 2.39793 | 0.8 | 0.063 | 0.00e+0 |
ATP1A2 | 2.36339 | 0.953 | 0.142 | 0.00e+0 |
FGFR3 | 2.28261 | 0.828 | 0.023 | 0.00e+0 |
ATP1B2 | 2.12027 | 0.858 | 0.138 | 0.00e+0 |
GFAP | 2.09995 | 0.845 | 0.165 | 0.00e+0 |
HIF3A | 2.00844 | 0.839 | 0.042 | 0.00e+0 |
TPD52L1 | 1.90395 | 0.778 | 0.086 | 0.00e+0 |
SLC25A18 | 1.88953 | 0.823 | 0.082 | 0.00e+0 |
RYR3 | 1.8884 | 0.735 | 0.049 | 0.00e+0 |
RANBP3L | 1.86872 | 0.718 | 0.036 | 0.00e+0 |
SLC1A3 | 1.8576 | 0.905 | 0.246 | 0.00e+0 |