scREAD Data ID: AD00108
Species: Human
Region: Prefrontal cortex
Condition: Disease
Braak stage: 3 - 5
Gender: Male
Age: 77-90+ years
Number of AD associated cells: 11403
Number of control-like cells: 3704
Number of identified cell types: 7
Title: Human_and_Mouse Single-Nucleus Transcriptomics Reveal TREM2-dependent_and_TREM2-independent Cellular Responses in Alzheimer's Disease
Methodology: Single-nucleus RNA-seq
Protocol: 10x Genomics
GEO/synapse number: syn21125841
Pubmed ID: 31932797
Citation: Zhou Y, Song WM, Andhey PS, Swain A et al. Human_and_mouse single-nucleus transcriptomics reveal TREM2-dependent_and_TREM2-independent cellular responses in Alzheimer’s disease. Nat Med 2020 Jan;26(1):131-142.
Cell type & subcluster:
Gene expression
Point size:
Please enter a gene symbol.
Group:
Cell type of interest:
Log2 fold-change cutoff:
Adjusted p-value cutoff:
SLC1A2 | 2.86093 | 0.978 | 0.325 | 0.00e+0 |
ADGRV1 | 2.59936 | 0.935 | 0.115 | 0.00e+0 |
ATP1A2 | 2.46121 | 0.975 | 0.201 | 0.00e+0 |
GJA1 | 2.41141 | 0.878 | 0.071 | 0.00e+0 |
AQP4 | 2.3238 | 0.887 | 0.126 | 0.00e+0 |
ATP1B2 | 2.27351 | 0.897 | 0.166 | 0.00e+0 |
COL5A3 | 2.19993 | 0.84 | 0.08 | 0.00e+0 |
GLUL | 2.1838 | 0.944 | 0.291 | 0.00e+0 |
SLC25A18 | 2.0364 | 0.836 | 0.065 | 0.00e+0 |
FGFR3 | 2.00915 | 0.824 | 0.04 | 0.00e+0 |
RYR3 | 1.9492 | 0.841 | 0.083 | 0.00e+0 |
SDC4 | 1.9286 | 0.745 | 0.021 | 0.00e+0 |
TPD52L1 | 1.92438 | 0.786 | 0.065 | 0.00e+0 |
CLU | 1.89695 | 0.973 | 0.584 | 0.00e+0 |
SLC14A1 | 1.89389 | 0.69 | 0.02 | 0.00e+0 |